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%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% %%% Bibtex file for my thesis %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% @article{dominici03, author = "F.~{Dominici} and M.~Griswold and E.~Johnson and S.L.~Zeger", title = "Disease case and their medical costst attributable to smoking: an analysis of the national medical expenditure survey", journal = "Journal of Econometrics", pages = "135-151", volume = 112, number = , year = 2003} @article{Deb97, author = "P.~Deb and P.K.~Trivedi", title = "Demand for medical care by the elderly: a finite mixture approach", journal = "Journal of applied econometrics", volume = 12, pages = "313-336", year = 1997} @article{Thirumalai96, title = "Protein folding kinetics: timescales, pathways and energy landscapes in terms of sequence-dependent properties", author = "T. Veitshans and D. Klimov and D. Thirumalai", journal = "Folding \& Design", volume = 2, numeber = 1, pages = "1--22", year = 1996 } @ARTICLE{Anfinsen73, AUTHOR = "C. B. Anfinsen", TITLE = "Principles that govern the folding of protein chains", JOURNAL = "Science", VOLUME = "181", PAGES = " 223-230", YEAR = "1973", } @INPROCEEDINGS {Papadimitriou98, AUTHOR = "P. Crescenzi and D. Goldman and C. Papadimitrou and A. Piccolboni and M. Yannakakis", TITLE = "On the complexity of protein folding", BOOKTITLE = "Proc. of STOC", YEAR = "1998", PAGES = "597-603" } @ARTICLE{Backofen2001, AUTHOR = "R. Backofen", TITLE = "The protein structure prediction problem: {A} constraint optimization approach using a new lower bound", JOURNAL = "Constraints", volume = 6, number = "2--3", pages = "223--255", year = 2001} @ARTICLE { Backofen99, AUTHOR = "R. Backofen and S. Will and Erich Bornberg-Bauer", TITLE = "Application of constraint programming techniques for structure prediction of lattice proteins with extended alphabet", JOURNAL = "Bioinformatics", VOLUME = "15(3)", PAGES = "234-242", YEAR = "1999" } @INPROCEEDINGS{ Backofen2000FCC, AUTHOR = "R. Backofen", TITLE = "An upper bound for number of contacts in the {HP-model} on the face-centered-cubic lattice {(FCC)}", BOOKTITLE = "Proc. of the 11{$^{th}$} {Annual Simposium on Combinatorial Pattern Matching (CPM2000)}", SERIES = "{Lecture Notes in Computer Science}", VOLUME = "1848", EDITOR = "Raffaele Giancarlo and David Sankoff", YEAR = "2000", PAGES = "277-292", ADDRESS = "Berlin", PUBLISHER = "Springer-Verlag" } @INPROCEEDINGS { Backofen2001FCC, AUTHOR = "R. Backofen and S. Will", TITLE = "Optimally Compact Finite Sphere Packings --- Hydrophobic Cores in the {FCC}", BOOKTITLE = "Proc. of the 12{$^{th}$} {Annual Simposium on Combinatorial Pattern Matching ({CPM2001)}}", SERIES = "{Lecture Notes in Computer Science}", YEAR = "2001", } @INPROCEEDINGS { BackofenWill99, AUTHOR = "R. Backofen and S. Will", TITLE = "Excluding symmetries in constraint-based search", BOOKTITLE = "Proceedings of 5{$^{th}$} {International Conference on Principle and Practice of Constraint Programming (CP'99)}", SERIES = "{Lecture Notes in Computer Science}", VOLUME = "1713", EDITOR = "Joxan Jaffar", YEAR = "1999", PAGES = "73-87", ADDRESS = "Berlin", PUBLISHER = "Springer-Verlag" } @INPROCEEDINGS { BackofenWill01, AUTHOR = "R. Backofen and S. Will", TITLE = "Fast, Constraint-Based Threading of {HP}-sequences to Hydrophobic Cores", BOOKTITLE = "Proceedings of 7{$^{th}$} {International Conference on Principle and Practice of Constraint Programming (CP'01)}", SERIES = "{Lecture Notes in Computer Science}", VOLUME = "2239", EDITOR = "T. Walsh", YEAR = "2001", PAGES = "494--508", ADDRESS = "Berlin", PUBLISHER = "Springer-Verlag" } @INPROCEEDINGS { SK01, AUTHOR = "M. T. Swain and G. J. L. Kemp", TITLE = "A {CLP} Approach to the Protein Side-Chain Placement Problem", BOOKTITLE = "Proceedings of 7{$^{th}$} {International Conference on Principle and Practice of Constraint Programming (CP'01)}", SERIES = "{Lecture Notes in Computer Science}", VOLUME = "2239", EDITOR = "T. Walsh", YEAR = "2001", PAGES = "479--493", ADDRESS = "Berlin", PUBLISHER = "Springer-Verlag" } @ARTICLE { YueDill93, AUTHOR = "K. Yue and K. A. Dill", TITLE = "Sequence-structure relationships in proteins and copolymers", JOURNAL = "{Physical Review E}", YEAR = "1993", VOLUME = "48(3)", PAGES ="2267-2278", MONTH = "September", } @ARTICLE { McCrippen91, AUTHOR = "G. M. Crippen", TITLE = "Prediction of protein folding from amino acid sequence over discrete conformation spaces", JOURNAL = "{Biochemistry}", YEAR = "1991", VOLUME = "30", PAGES ="4232-4237" } @article{hill-fernandez98a:JC, author = {A. Fern\'{a}ndez and P. M. Hill}, title = {A Comparative Study of Eight Constraint Programming Languages over the {B}oolean and Finite Domains}, year = {2000}, volume = 5, pages = {275--301}, publisher = {Kluwer}, journal = {Journal of Constraints} } @article{ clpfd, author = "P. Codognet and D. Diaz", title = "Compiling Constraints in clp({FD})", journal = "Journal of Logic Programming", volume = "27", number = "3", pages = "185-226", year = "1996" } %%%%%%%%%%%%% FINE